Learning the Comparing and Converting Method of Sequence Phred Quality Score
Authors
Henghua Shi, Weiyu Li, Xin Xu
Corresponding Author
Henghua Shi
Available Online September 2016.
- DOI
- 10.2991/meici-16.2016.55How to use a DOI?
- Keywords
- Phred quality scores; Sequence; Bioinformatics; FASTQ format
- Abstract
The Phred quality score can measure the sequence quality, and quality scores are normally stored together with the nucleotide sequence in the widely accepted FASTQ format. For sequence raw reads with various FASTQ formats, the range of scores will depend on the technology and the base caller used. With the different technology, the range of scores is different. For learning the comparing and converting method of sequence Phred quality score, we do an experiment, and analyze the different between various FASTQ quality formats.
- Copyright
- © 2016, the Authors. Published by Atlantis Press.
- Open Access
- This is an open access article distributed under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).
Cite this article
TY - CONF AU - Henghua Shi AU - Weiyu Li AU - Xin Xu PY - 2016/09 DA - 2016/09 TI - Learning the Comparing and Converting Method of Sequence Phred Quality Score BT - Proceedings of the 2016 6th International Conference on Management, Education, Information and Control (MEICI 2016) PB - Atlantis Press SP - 260 EP - 263 SN - 1951-6851 UR - https://doi.org/10.2991/meici-16.2016.55 DO - 10.2991/meici-16.2016.55 ID - Shi2016/09 ER -