Bioinformatic Analysis of Strawberry PTOX Gene

DOI

10.2991/bbbs-18.2018.7How to use a DOI?

Keywords

PTOX; Malus x domestica closest relative; the plastid terminal oxidase.

Abstract

PTOX has always been known as a key factor of defense response in plant testa. Recent studies show that The plastid terminal oxidase (plastid terminal oxidase, PTOX) is a nuclear encoded, plastid located plastid quinoxone oxidoreductase (plastid quinone oxidase). PTOX is the terminal oxidase of the plant chloroplast respiration. In this research we chosen PTOX gene of 9 kinds species, downloaded their nucleotide and protein sequence from NCBI as the research object, found strawberry PTOX gene via bioinformation analyses, constructed phylogenetic tree. At the same time, we analyzed the strawberry PTOX gene of physical and chemical properties and its protein structure and so on. The phylogenetic tree showed that strawberry and Malus x domestica closest relative. By the protein prediction, we found that the protein owed one proper signal peptide without obvious transmembrane regions.

Copyright

© 2018, the Authors. Published by Atlantis Press.

Open Access

This is an open access article distributed under the CC BY-NC license (http://creativecommons.org/licenses/by-nc/4.0/).

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TY  - CONF
AU  - Xiran Wang
AU  - Jiangang He
AU  - Haoru Tang
PY  - 2018/04
DA  - 2018/04
TI  - Bioinformatic Analysis of Strawberry PTOX Gene
BT  - Proceedings of the 2018 International Workshop on Bioinformatics, Biochemistry, Biomedical Sciences (BBBS 2018)
PB  - Atlantis Press
SP  - 29
EP  - 32
SN  - 2468-5747
UR  - https://doi.org/10.2991/bbbs-18.2018.7
DO  - 10.2991/bbbs-18.2018.7
ID  - Wang2018/04
ER  -